Danith Ly

Professor Carnegie Mellon University

  • Pittsburgh PA

Danith Ly's research is focused on the design and development of molecular tools and reagents to regulate gene expression.

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Carnegie Mellon University

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Biography

For the past several years, Danith Ly's research has been focused on the design and development of molecular tools and reagents to regulate gene expression and probe protein localization and dynamics in human somatic and embryonic stem cells (ESC). He is particularly interested in dissecting the genetic blueprint of human ESC and addressing fundamental questions pertaining to the cellular origins of cancer. More recently, he has expanded his research program into other areas including protein design, tissue engineering and molecular self-assembly.

Areas of Expertise

Stem Cells
Reagents
Molecular Tools
Tissue Engineering
Cellular Origins of Cancer
Embryonic Development
Protein Design

Media Appearances

Peptide nucleic acids progress for gene editing and antisense drugs

C&EN  online

2023-03-28

Danith Ly of Carnegie Mellon University and his colleagues addressed this limitation in 2006 when they refashioned PNAs’ peptide backbones to improve their ability to bind selectively to nucleic acids (J. Am. Chem. Soc. 2006, DOI: 10.1021/ja0625576). By simply adding a substituent like a hydroxymethyl group a few carbons down the peptide chain from the nucleobase—at the γ position—they changed PNAs’ shape from a randomly folded molecule to an ordered helix stabilized by base stacking.

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Molecular Converter Switches Genetic Information from Right- to Left-Handed

Carnegie Mellon University  online

2018-12-13

In a step toward overcoming this obstacle, Danith Ly, a professor of chemistry at Carnegie Mellon, and colleagues at the Institute for Biomolecular Design and Discovery (IBD), invented a peptide nucleic acid-based molecular converter that can switch genetic information from its normal right-handed helical confirmation to a left-handed version. Researchers could use this left-handed molecule in molecular computing without having to worry about it binding with the host’s DNA.

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Synthetic molecule invades double-stranded DNA

EurekAlert!  online

2018-11-12

The work was carried out by an international team of experts, including Carnegie Mellon Professor of Chemistry Danith Ly, an expert in peptide nucleic acid design, chemistry postdoc Shivaji Thadke and chemistry graduate student Dinithi Perera, Chemistry Professor and nuclear magnetic resonance expert Roberto Gil, and Arnab Mukherjee, a computer scientist at The Indian Institute of Science Education and Research at Pune.

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Education

Georgia Institute of Technology

Ph.D.

Organic Chemistry

Georgia Institute of Technology

B.S.

Chemical Engineering