John Bukowy, Ph.D.

Associate Professor Milwaukee School of Engineering

  • Milwaukee WI

Dr. John Bukowy's area of expertise include software development and machine learning.

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1 min

“Rethink What’s Possible” - MSOE sits down with Sheila Ross and John Bukowy to talk about Humanizing Machine Learning

On Rethink What’s Possible, a podcast by Milwaukee School of Engineering, MSOE students, faculty, staff, alumni and community partners share their inventions, research, industry trends, projects, experiences and how they’re rethinking what's possible. Artificial intelligence. Machine learning. High performance computing. Super computers. These terms have been around for quite a while now, but only in recent years the research has been put into practice and there are no signs of it slowing down. Episode Three, 'Humanizing Machine Learning,' Artificial intelligence (AI) is becoming prominent in more and more industries each day, including health care. Artificial intelligence (AI) is becoming prominent in more and more industries each day, including health care. Join Dr. Sheila Ross and Dr. John Bukowy, AI faculty experts from Milwaukee School of Engineering (MSOE) and student Ethan Hindes as they discuss the advancements of AI in “Humanizing Machine Learning,” part of the MSOE podcast, “Rethink What’s Possible.” They talk about its impact on their research with the Medical College of Wisconsin to identify and assess the severity of damage to blood vessels in kidneys. Hindes also discusses how he found his way to major in computer science. The podcast is available for download and well worth listening to. And, if you are a journalist interested in learning more or arranging an interview with Dr. Ross or Bukowy – simply click on either expert's icon now to arrange an interview today.

John Bukowy, Ph.D.Sheila Ross, Ph.D.

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Education, Licensure and Certification

Ph.D.

Physiology

Medical College of Wisconsin

2018

M.S.

Electrical Engineering

Illinois Institute of Technology

2012

B.S.

Biomedical Engineering

Marquette University

2008

Biography

Dr. John Bukowy is an assistant professor in MSOE's Computer Science and Software Engineering Department where he teaches courses in computer science, software development and machine learning. He joined the faculty in 2019. Before joining academia, he worked as a lead quality assurance engineer for MERGE Healthcare.

Accomplishments

American Heart Association Predoctoral Fellowship

Medical College of Wisconsin , 2016

Trainee Travel Award

SRC Renal Hemodynamics Conference, Big Sky, Montana, 2016

Best Graduate Student Award

Cardiovascular Research Center Retreat, Medical College of Wisconsin, 2017

Affiliations

  • American Heart Association : Member
  • Biomedical Engineering Society (BMES) : Member

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Event and Speaking Appearances

Ultrasound indicator dilution quantifies renal blood flow distribution in salt-resistant and salt-sensitive rat model of hypertension

FASEB Renal Hemodynamics and Cardiovascular Function in Health and Disease  Big Sky, Montana, 2016

Research Grants

T32 NIH Training Grant

Medical College of Wisconsin

2015 - 2016

Selected Publications

Increased Perfusion Pressure Drives Renal T-Cell Infiltration in the Dahl Salt-Sensitive Rat

Hypertension

Evans, L.C., Petrova, G., Kurth, T., Yang, C., Bukowy, J.D., Mattson, D.L., Cowley Jr, A.W.

2017

Renal T-cell infiltration is a key component of salt-sensitive hypertension in Dahl salt-sensitive (SS) rats. Here, we use an electronic servo-control technique to determine the contribution of renal perfusion pressure to T-cell infiltration in the SS rat kidney. An aortic balloon occluder placed around the aorta between the renal arteries was used to maintain perfusion pressure to the left kidney at control levels, ≈128 mm Hg, during 7 days of salt-induced hypertension, whereas the right kidney was exposed to increased renal perfusion pressure that averaged 157±4 mm Hg by day 7 of high-salt diet. The number of infiltrating T cells was compared between the 2 kidneys. Renal T-cell infiltration was significantly blunted in the left servo-controlled kidney compared with the right uncontrolled kidney. The number of CD3(+), CD3(+)CD4(+), and CD3(+)CD8(+) T cells were all significantly lower in the left servo-controlled kidney. This effect was not specific to T cells because CD45R(+) (B cells) and CD11b/c(+) (monocytes and macrophages) cell infiltrations were all exacerbated in the hypertensive kidneys. Increased renal perfusion pressure was also associated with augmented renal injury, with increased protein casts and glomerular damage in the hypertensive kidney. Levels of norepinephrine were comparable between the 2 kidneys, suggestive of equivalent sympathetic innervation. Renal infiltration of T cells was not reversed by the return of renal perfusion pressure to control levels after 7 days of salt-sensitive hypertension. We conclude that increased pressure contributes to the initiation of renal T-cell infiltration during the progression of salt-sensitive hypertension in SS rats.

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Inhibition of Mammalian Target of Rapamycin Complex 1 Attenuates Salt-Induced Hypertension and Kidney Injury in Dahl Salt-Sensitive Rats

Hypertension

Kumar, V., Wollner, C., Kurth, T., Bukowy, J.D., Cowley Jr, A.W.

2017

The goal of the present study was to explore the protective effects of mTORC1 (mammalian target of rapamycin complex 1) inhibition by rapamycin on salt-induced hypertension and kidney injury in Dahl salt-sensitive (SS) rats. We have previously demonstrated that H2O2 is elevated in the kidneys of SS rats. The present study showed a significant upregulation of renal mTORC1 activity in the SS rats fed a 4.0% NaCl for 3 days. In addition, renal interstitial infusion of H2O2 into salt-resistant Sprague Dawley rats for 3 days was also found to stimulate mTORC1 activity independent of a rise of arterial blood pressure. Together, these data indicate that the salt-induced increases of renal H2O2 in SS rats activated the mTORC1 pathway. Daily administration of rapamycin (IP, 1.5 mg/kg per day) for 21 days reduced salinduced hypertension from 176.0±9.0 to 153.0±12.0 mm Hg in SS rats but had no effect on blood pressure salt sensitivity in Sprague Dawley treated rats. Compared with vehicle, rapamycin reduced albumin excretion rate in SS rats from 190.0±35.0 to 37.0±5.0 mg/d and reduced the renal infiltration of T lymphocytes (CD3(+)) and macrophages (ED1(+)) in the cortex and medulla. Renal hypertrophy and cell proliferation were also reduced in rapamycin-treated SS rats. We conclude that enhancement of intrarenal H2O2 with a 4.0% NaCl diet stimulates the mTORC1 pathway that is necessary for the full development of the salt-induced hypertension and kidney injury in the SS rat.

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Region-Based Convolutional Neural Nets for Localization of Glomeruli in Trichrome-Stained Whole Kidney Sections

Journal of the American Society of Nephrology

Bukowy, J.D., Dayton, A., Cloutier, D., Manis, A.D., Staruschenko, A., Lombard, J.H., Woods, L.C.S., Beard, D.A., Cowley, A.W.

2018

Background: Histologic examination of fixed renal tissue is widely used to assess morphology and the progression of disease. Commonly reported metrics include glomerular number and injury. However, characterization of renal histology is a time-consuming and user-dependent process. To accelerate and improve the process, we have developed a glomerular localization pipeline for trichrome-stained kidney sections using a machine learning image classification algorithm.

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