Shirley Baker

Professor University of Florida

  • Gainesville FL

Shirley Baker has expertise in molluscan biology and aquaculture.

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Biography

Shirley Baker's research addresses knowledge gaps that limit our understanding of cultured clams and natural or restored oyster reefs in Florida’s coastal and estuarine ecosystems. She examines the effects of water quality on shellfish productivity, the physiological mechanisms that underlie those effects, the provision of ecosystem services by shellfish, and the development of models to predict impacts of water quality parameters on shellfish productivity and provision of ecosystem services.

Areas of Expertise

Shellfish Productivity
Provision of Ecosystem Services
Provision of Ecosystem Services by Shellfish
Effects of Water Quality on Shellfish Productivity
Physiological Mechanisms That Underlie the Effects of Water Quality on Shellfish Productivity
Development of Models to Predict Impacts of Water Quality Parameters on Shellfish Productivity

Social

Articles

Standardized invasive species terminology for effective education of Floridians

Journal of Extension

Basil V Iannone III, et al.

2021-02-02

This publication introduces a standardized set of seven terms compiled by the members of the UF|IFAS Invasive Species Council that can describe most situations involving invasive species. The goal of this list is to promote a common language among Extension and outreach professionals. This common language will improve invasive species education and limit confusion caused by the excessive jargon used to describe invasive species and the fact that much of this jargon is used incorrectly.

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Development of a rapid colorimetric strip method for determination of volatile bases in mahi-mahi and tuna

Journal of Food Science

Jing Bai, et al.

2021-04-29

Tuna (Thunnus albacares) and mahi-mahi (Coryphaena hippurus) are two major fish species responsible for scombroid poisoning in the United States. The purpose of this research was to develop a low-cost and easily operated colorimetric strip method for the rapid determination of spoilage degree via amine response in mahi-mahi and tuna.

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Carbon Mineralization Associated with Aquaculture of the Northern Quahog Mercenaria mercenaria

Journal of Shellfish Research

Patrick Baker and Shirley M Baker

2021-02-02

Molluscs mineralize carbon as calcium carbonate in shells within a protein matrix that is a small portion of the total shell mass. In parts of Florida, the northern quahog Mercenaria mercenaria is cultured in mesh bags in shallow coastal marine habitats. These habitats were selected by the State of Florida for their pre-existing lack of large molluscan populations, so most of the shell material harvested by aquaculture operations would not otherwise exist.

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Media

Spotlight

4 min

Farm but no fowl: How Florida aquaculture is growing the economy

Florida’s thriving aquaculture industry is a vital part of the state’s economy, generating more than $165 million in sales annually and supporting jobs across rural and coastal communities. Recognized as agriculture by the Florida Legislature in 1993, aquaculture contributes to food security, environmental sustainability and economic resilience. “Just like terrestrial, land-based agriculture, aquaculture is the process of growing or raising a product,” said Shirley Baker, UF/IFAS professor of aquaculture and associate director of the School of Forest, Fisheries and Geomatics Sciences. “The people who do the work consider themselves farmers. Their products are simply plants and animals grown or raised underwater.” Overseen by the Florida Department of Agriculture & Consumer Services (FDACS), the industry includes an estimated 1,500 varieties of food fish, bait fish, mollusks, aquatic plants, alligators, turtles, crustaceans, amphibians, caviar and ornamental fish. With proper regulatory support, aquaculture can continue to be a driving force in Florida’s economy and environmental stewardship. The hallmark of Florida aquaculture is ornamental, or tropical fish, the saltwater and freshwater species bred for aquariums. In 2023, the sector generated more than $57 million, making the state the country’s top pet fish producer. In fact, 95% of ornamental fish in the United States come from the Sunshine State. About 90% of Florida’s ornamental fish are freshwater varieties. Farmers primarily raise live-bearing species in sterilized earthen ponds dug into loam or bedrock. They fill ponds with sexually mature fish called broodstock and harvest offspring using baited traps. Most egg-laying fish are grown in commercial hatcheries. Like ornamental fish, the demand for farmed seafood has grown as wild-caught sources are increasingly depleted. Globally, more than 50% of all seafood for human consumption is produced through aquaculture. “Seafood is considered one of the most in-demand sources of lean protein in the world, and it has to come from somewhere,” said Matthew DiMaggio, director of the UF/IFAS Tropical Aquaculture Laboratory in Ruskin. “The ocean can't produce any more than it already has, so aquaculture has to make up the deficit.” In Florida, as the number of fish farms and the scale of their operations have grown, the value of food fish sales has skyrocketed. Between 2018 and 2023, sales rose from $4 million to $26 million, a 550% increase. Some of the most common Florida food fish are tilapia, striped bass, cobia, pompano and red drum. They’re housed in various ways. Operations can include fiberglass ponds, vats and tanks inside greenhouses and recirculating systems occupying entire warehouses. Farmers typically start with fingerlings, or juvenile fish, purchased from reputable suppliers. Aquaculture farmers share their experiences Evans Farm of Pierson, Florida, is among the pioneering food fish farms in the state. Originally cattle farmers, the company expanded to sell tilapia, striped bass and caviar harvested from sturgeon. Fish are kept in filtered, recirculating ponds and long tanks known as raceways. They’re transported live to grocery stores and markets in vans outfitted with tanks and filtration systems. “Our fish are thriving, and they’re healthy. We grow them with great water quality, and we feed them excellent food,” said Jane Davis, who owns the business with her mother and brothers. “Although they’re raised in water, they’re no different than other agriculture crops, whether it's cattle, chickens or anything else.” Mollusks are another significant contributor to Florida aquaculture. While the sector includes oysters and scallops, clams are the dominating commodity; in 2023, they brought in $32 million of the state’s $43 million in mollusk sales. Clam farmers generally obtain grain-sized seed clams from hatcheries. The smallest varieties are initially cared for in nursery systems. Once the shells become large enough, they’re transferred to bags submerged off the coast. Cedar Key resident Heath Davis, no relation to Jane Davis, transitioned from fishing to clam farming in the mid-1990s. He and his father, Mike Davis, own Cedar Key Seafarms, one of the state’s leading wholesale clam distributors. “Before, as fishermen, we would go out and place nets wherever we thought the fish were,” Heath Davis said. “But clamming is like farming. We lease a 2-acre, underwater plot from the state and harvest the product from our designated field.” The Florida Aquaculture Plan In November, the Florida Aquaculture Review Council, the official conduit between FDACS and farmers, published the latest revision of the Florida Aquaculture Plan, a detailed list of research and development priorities. Florida’s climate, infrastructure, streamlined regulations and positive business environment have positioned the state to become the national leader in aquaculture, but innovation is required to remain competitive, according to the document. It’s a message Heath Davis echoed. “Aquaculture farming is such a huge part of Florida’s economy,” he said. “It could hold some of the answers needed to sustain the growing number of people living on this peninsula.”

Shirley Baker