Tomasz Arodz, Ph.D.

Associate Professor VCU College of Engineering

  • Engineering East Hall, Room E4252, Richmond VA

Dr. Arodz's research focuses on machine learning and bioinformatics

Contact

VCU College of Engineering

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Biography

Tomasz Arodz is an associate professor in the Department of Computer Science at VCU. His research has been funded by NSF, NIH, and CDC. Dr. Arodz holds a Ph.D. in computer science from AGH University of Science and Technology in Krakow, Poland. He is a laureate of the Prime Minister of Poland Award for his Ph.D. dissertation. Dr. Arodz also holds a M.Sc. in biotechnology from Jagiellonian University in Krakow.

Industry Expertise

Research
Education/Learning

Areas of Expertise

Biomedical Data Science
Foundational Models
Bioinformatics
Machine Learning & Deep Learning
Quantum Machine Learning

Accomplishments

Researcher of the Year 2020

2020-01-01

VCU Computer Science Department

NSF CAREER Grant Award

2015-01-01

National Science Foundation

Prime Minister of Poland Award

2008-01-01

Laureate of the Award for Ph.D. Dissertation

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Education

AGH University of Science and Technology

Ph.D.

Computer Science

2007

AGH University of Science and Technology

M.S.

Computer Science

2003

Jagiellonian University

M.S.

Biotechnology

2009

Media Appearances

To Relieve Holiday Stress, Techies Trot Out Artificial Intelligence

Style Weekly  print

2017-12-19

By now the journey to 2018 can feel more like a crawl than a mad dash.

There's pressure to entertain family, reconnect with old friends and take that special someone on a memorable date. But a Richmond startup says artificial intelligence can solve the indecision over where to go and what to do. While some experts caution against placing exaggerated faith in artificial intelligence, early adopters are hoping for a more perfect holiday experience.

. . . Just remember, if you're struggling to plan a not-so-silent night, don't give up on your gut, says Tom Arodz, another VCU professor who studies machine learning.

"AI may learn to never recommend a symphony to heavy-metal lovers," Arodz says. "But just like with human instinct, it is often difficult to say why any particular recommendation is made."

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Selected Articles

Real-valued group testing for quantitative molecular assays

Conference on Research in Computational Molecular Biology RECOMB'2022

We proposed a new group testing approach tailored for scenarios where quantitative measurements are available (e.g. Ct values in PCR tests). It allows using much fewer tests than there are samples to be tested.

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The vaginal microbiome and preterm birth

Nature Medicine 25:1012-1021, 2019

As part of a large microbiome study by VCU cMEDA team, we created a machine learning model to quantify effects of human microbiome composition on pregnancy outcomes.

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Approximation capabilities of Neural ODEs and Invertible Residual Networks

International Conference on Machine Learning ICML'2020

We used techniques from topology (embedding of homeomorphisms into flows) to analyze whether two popular recent architectures for creating invertible deep nets, neural ordinary differential equations and invertible ResNets, have the capability to model arbitrary invertible function.

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